Cluster: SW115_maxbin.005_sub_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: SW115_maxbin.005_sub
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_70283 | k141_70283_29 | 32397 | 32735 | - | 4.A.3.1.2 |
| TF | k141_70283 | k141_70283_30 | 32950 | 33954 | - | LacI |
| TC | k141_70283 | k141_70283_31 | 34311 | 36077 | + | 4.A.3.1.1 |
| CAZyme | k141_70283 | k141_70283_32 | 36144 | 37583 | + | GH1 |
| TF | k141_70283 | k141_70283_33 | 38009 | 39019 | - | LacI |
| TC | k141_70283 | k141_70283_34 | 39296 | 41083 | + | 4.A.3.1.1 |
| CAZyme | k141_70283 | k141_70283_35 | 41159 | 42580 | + | GH1 |
Gene ID: k141_70283_29
Type: TC
Location: 32397 - 32735 (-)
Type: TC
Location: 32397 - 32735 (-)
Gene ID: k141_70283_30
Type: TF
Location: 32950 - 33954 (-)
Type: TF
Location: 32950 - 33954 (-)
Gene ID: k141_70283_31
Type: TC
Location: 34311 - 36077 (+)
Type: TC
Location: 34311 - 36077 (+)
Gene ID: k141_70283_32
Type: CAZyme
Location: 36144 - 37583 (+)
Type: CAZyme
Location: 36144 - 37583 (+)
Gene ID: k141_70283_33
Type: TF
Location: 38009 - 39019 (-)
Type: TF
Location: 38009 - 39019 (-)
Gene ID: k141_70283_34
Type: TC
Location: 39296 - 41083 (+)
Type: TC
Location: 39296 - 41083 (+)
Gene ID: k141_70283_35
Type: CAZyme
Location: 41159 - 42580 (+)
Type: CAZyme
Location: 41159 - 42580 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.