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Cluster: SW113_bin.62_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_133447 k141_133447_15 18227 20059 + GH13_11
pfam k141_133447 k141_133447_16 20092 20847 + DUF5662
TF k141_133447 k141_133447_17 20766 21713 - HTH_1
TC k141_133447 k141_133447_18 21974 22996 + 3.A.1.24.2
TC k141_133447 k141_133447_19 22996 23661 + 3.A.1.24.5
TC k141_133447 k141_133447_20 23851 24750 + 3.A.1.24.5
STP k141_133447 k141_133447_21 24862 25518 - TetR_N
pfam k141_133447 k141_133447_22 25519 26505 - PseudoU_synth_2
TC k141_133447 k141_133447_23 26666 27886 - 3.A.1.11.7
TC k141_133447 k141_133447_24 27909 28724 - 3.A.1.11.1
TC k141_133447 k141_133447_25 28721 29548 - 3.A.1.11.1
TC k141_133447 k141_133447_26 29613 30776 - 3.A.1.11.8
Gene ID: k141_133447_15
Type: CAZyme
Location: 18227 - 20059 (+)
Gene ID: k141_133447_16
Type: pfam
Location: 20092 - 20847 (+)
Gene ID: k141_133447_17
Type: TF
Location: 20766 - 21713 (-)
Gene ID: k141_133447_18
Type: TC
Location: 21974 - 22996 (+)
Gene ID: k141_133447_19
Type: TC
Location: 22996 - 23661 (+)
Gene ID: k141_133447_20
Type: TC
Location: 23851 - 24750 (+)
Gene ID: k141_133447_21
Type: STP
Location: 24862 - 25518 (-)
Gene ID: k141_133447_22
Type: pfam
Location: 25519 - 26505 (-)
Gene ID: k141_133447_23
Type: TC
Location: 26666 - 27886 (-)
Gene ID: k141_133447_24
Type: TC
Location: 27909 - 28724 (-)
Gene ID: k141_133447_25
Type: TC
Location: 28721 - 29548 (-)
Gene ID: k141_133447_26
Type: TC
Location: 29613 - 30776 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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