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Cluster: SW113_bin.62_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_257653 k141_257653_162 180976 181794 + 3.A.1.17.13
TC k141_257653 k141_257653_163 182005 183042 + 3.A.1.17.8
TC k141_257653 k141_257653_164 183057 183845 + 3.A.1.17.13
TF k141_257653 k141_257653_165 184045 185022 + LacI
pfam k141_257653 k141_257653_166 185475 186767 + SBP_bac_8
TC k141_257653 k141_257653_167 186918 187799 + 3.A.1.1.45
TC k141_257653 k141_257653_168 187799 188659 + 3.A.1.1.45
CAZyme k141_257653 k141_257653_169 188739 190607 + GH13_4
CAZyme k141_257653 k141_257653_170 190652 192139 + GH32
Gene ID: k141_257653_162
Type: TC
Location: 180976 - 181794 (+)
Gene ID: k141_257653_163
Type: TC
Location: 182005 - 183042 (+)
Gene ID: k141_257653_164
Type: TC
Location: 183057 - 183845 (+)
Gene ID: k141_257653_165
Type: TF
Location: 184045 - 185022 (+)
Gene ID: k141_257653_166
Type: pfam
Location: 185475 - 186767 (+)
Gene ID: k141_257653_167
Type: TC
Location: 186918 - 187799 (+)
Gene ID: k141_257653_168
Type: TC
Location: 187799 - 188659 (+)
Gene ID: k141_257653_169
Type: CAZyme
Location: 188739 - 190607 (+)
Gene ID: k141_257653_170
Type: CAZyme
Location: 190652 - 192139 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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