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Cluster: SW112_96_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_127299 k141_127299_78 78538 79854 - 2.A.1.25.5
CAZyme k141_127299 k141_127299_79 79903 83595 - GT2
TC k141_127299 k141_127299_80 83705 85621 - 9.B.18.2.1
CAZyme k141_127299 k141_127299_81 85638 86384 - GT2
pfam k141_127299 k141_127299_82 86414 87337 - Aminotran_4
TC k141_127299 k141_127299_83 87351 88037 - 9.B.18.1.2
pfam k141_127299 k141_127299_84 88053 89276 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
pfam k141_127299 k141_127299_85 89273 90103 - HpcH_HpaI
CAZyme k141_127299 k141_127299_86 90184 90999 - GT2
pfam k141_127299 k141_127299_87 91019 92173 - Glyco_tran_WbsX
CAZyme k141_127299 k141_127299_88 92653 93843 - GT4
Gene ID: k141_127299_78
Type: TC
Location: 78538 - 79854 (-)
Gene ID: k141_127299_79
Type: CAZyme
Location: 79903 - 83595 (-)
Gene ID: k141_127299_80
Type: TC
Location: 83705 - 85621 (-)
Gene ID: k141_127299_81
Type: CAZyme
Location: 85638 - 86384 (-)
Gene ID: k141_127299_82
Type: pfam
Location: 86414 - 87337 (-)
Gene ID: k141_127299_83
Type: TC
Location: 87351 - 88037 (-)
Gene ID: k141_127299_84
Type: pfam
Location: 88053 - 89276 (-)
Gene ID: k141_127299_85
Type: pfam
Location: 89273 - 90103 (-)
Gene ID: k141_127299_86
Type: CAZyme
Location: 90184 - 90999 (-)
Gene ID: k141_127299_87
Type: pfam
Location: 91019 - 92173 (-)
Gene ID: k141_127299_88
Type: CAZyme
Location: 92653 - 93843 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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