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Cluster: SW110_10_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_252831 k141_252831_8 11645 12808 + GT2
pfam k141_252831 k141_252831_9 12832 13242 + C_GCAxxG_C_C
CAZyme k141_252831 k141_252831_10 13242 14636 + GT2
pfam k141_252831 k141_252831_11 14629 15663 + APH
TC k141_252831 k141_252831_12 15797 16507 + 9.B.27.1.2
TC k141_252831 k141_252831_13 16604 17317 - 9.B.27.1.1
TF k141_252831 k141_252831_14 18269 19162 - HTH_1
TC k141_252831 k141_252831_15 19400 20446 + 2.A.98.1.4
TC k141_252831 k141_252831_16 20372 21037 - 2.A.115.1.1
pfam k141_252831 k141_252831_17 21416 22342 + EamA | EamA
TC k141_252831 k141_252831_18 22391 24976 + 9.B.74.1.1
TC k141_252831 k141_252831_19 24973 27165 + 9.B.74.1.1
Gene ID: k141_252831_8
Type: CAZyme
Location: 11645 - 12808 (+)
Gene ID: k141_252831_9
Type: pfam
Location: 12832 - 13242 (+)
Gene ID: k141_252831_10
Type: CAZyme
Location: 13242 - 14636 (+)
Gene ID: k141_252831_11
Type: pfam
Location: 14629 - 15663 (+)
Gene ID: k141_252831_12
Type: TC
Location: 15797 - 16507 (+)
Gene ID: k141_252831_13
Type: TC
Location: 16604 - 17317 (-)
Gene ID: k141_252831_14
Type: TF
Location: 18269 - 19162 (-)
Gene ID: k141_252831_15
Type: TC
Location: 19400 - 20446 (+)
Gene ID: k141_252831_16
Type: TC
Location: 20372 - 21037 (-)
Gene ID: k141_252831_17
Type: pfam
Location: 21416 - 22342 (+)
Gene ID: k141_252831_18
Type: TC
Location: 22391 - 24976 (+)
Gene ID: k141_252831_19
Type: TC
Location: 24973 - 27165 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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