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Cluster: SW109_bin.36_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_40005 k141_40005_8 7221 8225 - 8.A.5.1.6
pfam k141_40005 k141_40005_9 8493 9923 - DUF4179
TF k141_40005 k141_40005_10 9923 10441 - GerE
CAZyme k141_40005 k141_40005_11 10659 13787 - GH38
NULL(UNKNOWN) k141_40005 k141_40005_12 13818 14057 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_40005 k141_40005_13 14175 14957 - 2.A.5.5.2
Gene ID: k141_40005_8
Type: TC
Location: 7221 - 8225 (-)
Gene ID: k141_40005_9
Type: pfam
Location: 8493 - 9923 (-)
Gene ID: k141_40005_10
Type: TF
Location: 9923 - 10441 (-)
Gene ID: k141_40005_11
Type: CAZyme
Location: 10659 - 13787 (-)
Gene ID: k141_40005_12
Type:
Location: 13818 - 14057 (-)
Gene ID: k141_40005_13
Type: TC
Location: 14175 - 14957 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_40005_12 vegan > omnivore 3.14637 0.00147
k141_40005_12 vegetarian > omnivore 4.39702 0.01736
k141_40005_13 vegetarian > omnivore 1.62433 0.01047
k141_40005_13 vegetarian > vegan 1.85396 0.00694

🧭 Explore Read Mapping of CGC

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