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Cluster: SW109_bin.36_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_132542 k141_132542_4 3056 4036 - 2.A.28.2.5
CAZyme k141_132542 k141_132542_5 4249 5190 + GT2
pfam k141_132542 k141_132542_6 5197 5760 - tRNA_edit
TC k141_132542 k141_132542_7 5808 6173 - 1.A.43.1.13
pfam k141_132542 k141_132542_8 6350 7429 + Acyl_transf_3
NULL(UNKNOWN) k141_132542 k141_132542_9 7436 7882 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_132542 k141_132542_10 7975 9540 - GH78
TF k141_132542 k141_132542_11 9757 10812 + HTH_AraC
TC k141_132542 k141_132542_12 10825 11568 - 9.B.158.1.1
NULL(UNKNOWN) k141_132542 k141_132542_13 11750 11962 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_132542 k141_132542_14 12167 13174 - 2.A.19.5.2
Gene ID: k141_132542_4
Type: TC
Location: 3056 - 4036 (-)
Gene ID: k141_132542_5
Type: CAZyme
Location: 4249 - 5190 (+)
Gene ID: k141_132542_6
Type: pfam
Location: 5197 - 5760 (-)
Gene ID: k141_132542_7
Type: TC
Location: 5808 - 6173 (-)
Gene ID: k141_132542_8
Type: pfam
Location: 6350 - 7429 (+)
Gene ID: k141_132542_9
Type:
Location: 7436 - 7882 (+)
Gene ID: k141_132542_10
Type: CAZyme
Location: 7975 - 9540 (-)
Gene ID: k141_132542_11
Type: TF
Location: 9757 - 10812 (+)
Gene ID: k141_132542_12
Type: TC
Location: 10825 - 11568 (-)
Gene ID: k141_132542_13
Type:
Location: 11750 - 11962 (-)
Gene ID: k141_132542_14
Type: TC
Location: 12167 - 13174 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_132542_5 vegan > omnivore 1.11390 0.00147
k141_132542_8 vegan > omnivore 1.08781 0.00147
k141_132542_12 vegan > omnivore 1.29536 0.00147

🧭 Explore Read Mapping of CGC

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