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Cluster: SW109_bin.36_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_72342 k141_72342_10 9857 10708 + 3.A.1.26.7
TC k141_72342 k141_72342_11 10693 11580 + 3.A.1.26.7
TC k141_72342 k141_72342_12 11577 12380 + 3.A.1.25.4
pfam k141_72342 k141_72342_13 12402 13139 + PseudoU_synth_1 | PseudoU_synth_1
pfam k141_72342 k141_72342_14 13166 14500 + MatE | MatE | MurJ
CAZyme k141_72342 k141_72342_15 14667 17078 + GH2
CAZyme k141_72342 k141_72342_16 17305 20334 + GH3
NULL(UNKNOWN) k141_72342 k141_72342_17 20347 20766 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_72342 k141_72342_18 20802 22253 + GH43_35
Gene ID: k141_72342_10
Type: TC
Location: 9857 - 10708 (+)
Gene ID: k141_72342_11
Type: TC
Location: 10693 - 11580 (+)
Gene ID: k141_72342_12
Type: TC
Location: 11577 - 12380 (+)
Gene ID: k141_72342_13
Type: pfam
Location: 12402 - 13139 (+)
Gene ID: k141_72342_14
Type: pfam
Location: 13166 - 14500 (+)
Gene ID: k141_72342_15
Type: CAZyme
Location: 14667 - 17078 (+)
Gene ID: k141_72342_16
Type: CAZyme
Location: 17305 - 20334 (+)
Gene ID: k141_72342_17
Type:
Location: 20347 - 20766 (+)
Gene ID: k141_72342_18
Type: CAZyme
Location: 20802 - 22253 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_72342_14 vegan > omnivore 1.29498 0.00147
k141_72342_14 vegetarian > omnivore 1.57619 0.01047
k141_72342_17 vegan > omnivore 1.39968 0.00147
k141_72342_17 vegetarian > omnivore 1.25754 0.01736

🧭 Explore Read Mapping of CGC

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