dbCAN Logo

Cluster: SW109_bin.36_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42148 k141_42148_1 1 348 + 2.A.66.6.2
pfam k141_42148 k141_42148_2 372 1817 + PelG
NULL(UNKNOWN) k141_42148 k141_42148_3 1833 2204 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_42148 k141_42148_4 2201 3448 + GT4
CAZyme k141_42148 k141_42148_5 3472 4257 + GT2
pfam k141_42148 k141_42148_6 4247 5536 + DUF4832 | DUF4874
pfam k141_42148 k141_42148_7 5551 6993 - DUF4832 | DUF4874
TC k141_42148 k141_42148_8 7082 8608 + 2.A.66.1.40
CAZyme k141_42148 k141_42148_9 8572 9657 + GT2
Gene ID: k141_42148_1
Type: TC
Location: 1 - 348 (+)
Gene ID: k141_42148_2
Type: pfam
Location: 372 - 1817 (+)
Gene ID: k141_42148_3
Type:
Location: 1833 - 2204 (+)
Gene ID: k141_42148_4
Type: CAZyme
Location: 2201 - 3448 (+)
Gene ID: k141_42148_5
Type: CAZyme
Location: 3472 - 4257 (+)
Gene ID: k141_42148_6
Type: pfam
Location: 4247 - 5536 (+)
Gene ID: k141_42148_7
Type: pfam
Location: 5551 - 6993 (-)
Gene ID: k141_42148_8
Type: TC
Location: 7082 - 8608 (+)
Gene ID: k141_42148_9
Type: CAZyme
Location: 8572 - 9657 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_42148_1 vegan > omnivore 2.16511 0.00147
k141_42148_2 vegan > omnivore 1.78649 0.00147
k141_42148_3 vegan > omnivore 2.77562 0.00147
k141_42148_4 vegan > omnivore 2.35715 0.00147
k141_42148_5 vegan > omnivore 2.26281 0.00147
k141_42148_6 vegan > omnivore 2.68630 0.00147
k141_42148_7 vegan > omnivore 1.60017 0.00147
k141_42148_8 vegan > omnivore 1.31814 0.00147
k141_42148_9 vegan > omnivore 2.52927 0.00147

🧭 Explore Read Mapping of CGC

← Back to Cluster List