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Cluster: SW109_bin.36_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_78954 k141_78954_38 46477 48645 - GH2
TC k141_78954 k141_78954_39 48655 49497 - 3.A.1.1.18
TC k141_78954 k141_78954_40 49494 50366 - 3.A.1.1.25
STP k141_78954 k141_78954_41 50426 51733 - SBP_bac_1
TC k141_78954 k141_78954_42 51946 53736 + 9.B.33.1.1
TF k141_78954 k141_78954_43 53755 55344 + HTH_AraC | HTH_AraC
TC k141_78954 k141_78954_44 55553 56926 + 2.A.22.5.3
Gene ID: k141_78954_38
Type: CAZyme
Location: 46477 - 48645 (-)
Gene ID: k141_78954_39
Type: TC
Location: 48655 - 49497 (-)
Gene ID: k141_78954_40
Type: TC
Location: 49494 - 50366 (-)
Gene ID: k141_78954_41
Type: STP
Location: 50426 - 51733 (-)
Gene ID: k141_78954_42
Type: TC
Location: 51946 - 53736 (+)
Gene ID: k141_78954_43
Type: TF
Location: 53755 - 55344 (+)
Gene ID: k141_78954_44
Type: TC
Location: 55553 - 56926 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_78954_44 vegan > omnivore 1.12515 0.00147

🧭 Explore Read Mapping of CGC

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