Cluster: SW108_22_sub_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SW108_22_sub
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_91505 | k141_91505_55 | 57625 | 58983 | - | 2.A.33.1.1 |
| pfam | k141_91505 | k141_91505_56 | 59250 | 60173 | - | DHH | DHHA2 |
| STP | k141_91505 | k141_91505_57 | 60340 | 61293 | - | Glucokinase |
| TC | k141_91505 | k141_91505_58 | 61535 | 61867 | - | 4.A.3.2.3 |
| TC | k141_91505 | k141_91505_59 | 61877 | 62179 | - | 4.A.3.2.9 |
| TC | k141_91505 | k141_91505_60 | 62341 | 63684 | - | 4.A.3.2.2 |
| CAZyme | k141_91505 | k141_91505_61 | 63805 | 65205 | - | GH1 |
Gene ID: k141_91505_55
Type: TC
Location: 57625 - 58983 (-)
Type: TC
Location: 57625 - 58983 (-)
Gene ID: k141_91505_56
Type: pfam
Location: 59250 - 60173 (-)
Type: pfam
Location: 59250 - 60173 (-)
Gene ID: k141_91505_57
Type: STP
Location: 60340 - 61293 (-)
Type: STP
Location: 60340 - 61293 (-)
Gene ID: k141_91505_58
Type: TC
Location: 61535 - 61867 (-)
Type: TC
Location: 61535 - 61867 (-)
Gene ID: k141_91505_59
Type: TC
Location: 61877 - 62179 (-)
Type: TC
Location: 61877 - 62179 (-)
Gene ID: k141_91505_60
Type: TC
Location: 62341 - 63684 (-)
Type: TC
Location: 62341 - 63684 (-)
Gene ID: k141_91505_61
Type: CAZyme
Location: 63805 - 65205 (-)
Type: CAZyme
Location: 63805 - 65205 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_91505_59 | vegan > omnivore | 1.11104 | 0.00566 |