dbCAN Logo

Cluster: SW108_22_sub_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_91505 k141_91505_7 6008 6346 - 4.A.3.1.2
TF k141_91505 k141_91505_8 6561 7565 - LacI
TC k141_91505 k141_91505_9 7922 9697 + 4.A.3.1.1
CAZyme k141_91505 k141_91505_10 9764 11203 + GH1
TF k141_91505 k141_91505_11 11465 12502 - LacI
CAZyme k141_91505 k141_91505_12 12844 14286 + GH1
TC k141_91505 k141_91505_13 14463 16223 + 4.A.3.1.1
TF k141_91505 k141_91505_14 16558 17568 - LacI
TC k141_91505 k141_91505_15 17844 19622 + 4.A.3.1.1
CAZyme k141_91505 k141_91505_16 19699 21120 + GH1
TF k141_91505 k141_91505_17 21315 22079 - HTH_DeoR
sulfatase k141_91505 k141_91505_18 22286 23338 + S1_4
TC k141_91505 k141_91505_19 23664 24146 - 4.A.6.1.5
Gene ID: k141_91505_7
Type: TC
Location: 6008 - 6346 (-)
Gene ID: k141_91505_8
Type: TF
Location: 6561 - 7565 (-)
Gene ID: k141_91505_9
Type: TC
Location: 7922 - 9697 (+)
Gene ID: k141_91505_10
Type: CAZyme
Location: 9764 - 11203 (+)
Gene ID: k141_91505_11
Type: TF
Location: 11465 - 12502 (-)
Gene ID: k141_91505_12
Type: CAZyme
Location: 12844 - 14286 (+)
Gene ID: k141_91505_13
Type: TC
Location: 14463 - 16223 (+)
Gene ID: k141_91505_14
Type: TF
Location: 16558 - 17568 (-)
Gene ID: k141_91505_15
Type: TC
Location: 17844 - 19622 (+)
Gene ID: k141_91505_16
Type: CAZyme
Location: 19699 - 21120 (+)
Gene ID: k141_91505_17
Type: TF
Location: 21315 - 22079 (-)
Gene ID: k141_91505_18
Type: sulfatase
Location: 22286 - 23338 (+)
Gene ID: k141_91505_19
Type: TC
Location: 23664 - 24146 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_91505_11 vegetarian > omnivore 1.01042 0.01608

🧭 Explore Read Mapping of CGC

← Back to Cluster List