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Cluster: SW108_22_sub_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_183682 k141_183682_10 8757 9551 - 3.A.1.34.1
TC k141_183682 k141_183682_11 9544 10467 - 3.A.1.34.1
TC k141_183682 k141_183682_12 10672 11652 - 3.A.1.34.1
NULL(UNKNOWN) k141_183682 k141_183682_13 11813 12598 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_183682 k141_183682_14 12848 14251 - tRNA-synt_2 | tRNA_anti-codon
TC k141_183682 k141_183682_15 14433 14996 - 4.A.1.2.6
peptidase k141_183682 k141_183682_16 15241 16143 + S09.UPW
TC k141_183682 k141_183682_17 16328 18688 + 9.A.8.1.6
TC k141_183682 k141_183682_18 18810 20006 + 2.A.1.2.18
CAZyme k141_183682 k141_183682_19 20189 21565 + GH13_20
Gene ID: k141_183682_10
Type: TC
Location: 8757 - 9551 (-)
Gene ID: k141_183682_11
Type: TC
Location: 9544 - 10467 (-)
Gene ID: k141_183682_12
Type: TC
Location: 10672 - 11652 (-)
Gene ID: k141_183682_13
Type:
Location: 11813 - 12598 (-)
Gene ID: k141_183682_14
Type: pfam
Location: 12848 - 14251 (-)
Gene ID: k141_183682_15
Type: TC
Location: 14433 - 14996 (-)
Gene ID: k141_183682_16
Type: peptidase
Location: 15241 - 16143 (+)
Gene ID: k141_183682_17
Type: TC
Location: 16328 - 18688 (+)
Gene ID: k141_183682_18
Type: TC
Location: 18810 - 20006 (+)
Gene ID: k141_183682_19
Type: CAZyme
Location: 20189 - 21565 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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