Cluster: SW106_bin.36_CGC15
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: SW106_bin.36
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_90580 | k141_90580_35 | 39666 | 40910 | - | GT4 |
| pfam | k141_90580 | k141_90580_36 | 40923 | 41687 | - | BcrAD_BadFG |
| pfam | k141_90580 | k141_90580_37 | 41739 | 42902 | - | HGD-D |
| TC | k141_90580 | k141_90580_38 | 42980 | 43765 | - | 3.A.1.5.36 |
| TC | k141_90580 | k141_90580_39 | 43752 | 44750 | - | 3.A.1.5.35 |
| TC | k141_90580 | k141_90580_40 | 44754 | 45581 | - | 3.A.1.5.39 |
| TC | k141_90580 | k141_90580_41 | 45581 | 46534 | - | 3.A.1.5.11 |
| TC | k141_90580 | k141_90580_42 | 46621 | 48231 | - | 3.A.1.5.11 |
| pfam | k141_90580 | k141_90580_43 | 48416 | 49699 | - | HGD-D |
| TC | k141_90580 | k141_90580_44 | 50150 | 51220 | - | 3.A.1.1.3 |
| TC | k141_90580 | k141_90580_45 | 51224 | 52705 | - | 3.A.1.8.1 |
Gene ID: k141_90580_35
Type: CAZyme
Location: 39666 - 40910 (-)
Type: CAZyme
Location: 39666 - 40910 (-)
Gene ID: k141_90580_36
Type: pfam
Location: 40923 - 41687 (-)
Type: pfam
Location: 40923 - 41687 (-)
Gene ID: k141_90580_37
Type: pfam
Location: 41739 - 42902 (-)
Type: pfam
Location: 41739 - 42902 (-)
Gene ID: k141_90580_38
Type: TC
Location: 42980 - 43765 (-)
Type: TC
Location: 42980 - 43765 (-)
Gene ID: k141_90580_39
Type: TC
Location: 43752 - 44750 (-)
Type: TC
Location: 43752 - 44750 (-)
Gene ID: k141_90580_40
Type: TC
Location: 44754 - 45581 (-)
Type: TC
Location: 44754 - 45581 (-)
Gene ID: k141_90580_41
Type: TC
Location: 45581 - 46534 (-)
Type: TC
Location: 45581 - 46534 (-)
Gene ID: k141_90580_42
Type: TC
Location: 46621 - 48231 (-)
Type: TC
Location: 46621 - 48231 (-)
Gene ID: k141_90580_43
Type: pfam
Location: 48416 - 49699 (-)
Type: pfam
Location: 48416 - 49699 (-)
Gene ID: k141_90580_44
Type: TC
Location: 50150 - 51220 (-)
Type: TC
Location: 50150 - 51220 (-)
Gene ID: k141_90580_45
Type: TC
Location: 51224 - 52705 (-)
Type: TC
Location: 51224 - 52705 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_90580_38 | vegan > omnivore | 2.54085 | 0.00701 |
| k141_90580_39 | vegan > omnivore | 1.44498 | 0.00701 |
| k141_90580_40 | vegan > omnivore | 2.99396 | 0.00701 |
| k141_90580_41 | vegan > omnivore | 2.58605 | 0.00701 |
| k141_90580_42 | vegan > omnivore | 3.22593 | 0.00701 |