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Cluster: SW106_bin.36_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23484 k141_23484_6 5200 5538 - 4.A.3.1.2
TF k141_23484 k141_23484_7 5753 6757 - LacI
TC k141_23484 k141_23484_8 7114 8886 + 4.A.3.1.1
CAZyme k141_23484 k141_23484_9 9083 10522 + GH1
TF k141_23484 k141_23484_10 10966 11976 - LacI
TC k141_23484 k141_23484_11 12253 14010 + 4.A.3.1.1
CAZyme k141_23484 k141_23484_12 14086 15507 + GH1
TF k141_23484 k141_23484_13 15703 16467 - HTH_DeoR
sulfatase k141_23484 k141_23484_14 16674 17726 + S1_4
TC k141_23484 k141_23484_15 18052 18534 - 4.A.6.1.3
Gene ID: k141_23484_6
Type: TC
Location: 5200 - 5538 (-)
Gene ID: k141_23484_7
Type: TF
Location: 5753 - 6757 (-)
Gene ID: k141_23484_8
Type: TC
Location: 7114 - 8886 (+)
Gene ID: k141_23484_9
Type: CAZyme
Location: 9083 - 10522 (+)
Gene ID: k141_23484_10
Type: TF
Location: 10966 - 11976 (-)
Gene ID: k141_23484_11
Type: TC
Location: 12253 - 14010 (+)
Gene ID: k141_23484_12
Type: CAZyme
Location: 14086 - 15507 (+)
Gene ID: k141_23484_13
Type: TF
Location: 15703 - 16467 (-)
Gene ID: k141_23484_14
Type: sulfatase
Location: 16674 - 17726 (+)
Gene ID: k141_23484_15
Type: TC
Location: 18052 - 18534 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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