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Cluster: SW101_maxbin.014_sub_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_28451 k141_28451_1 1 1194 - GH32
TC k141_28451 k141_28451_2 1215 3053 - 4.A.1.2.1
TF k141_28451 k141_28451_3 3194 4225 - LacI
TF k141_28451 k141_28451_4 4222 5226 - LacI
CAZyme k141_28451 k141_28451_5 5378 7378 - PL12_1
TC k141_28451 k141_28451_6 7457 8266 - 4.A.6.1.14
TC k141_28451 k141_28451_7 8256 9041 - 4.A.6.1.14
TC k141_28451 k141_28451_8 9060 9551 - 4.A.6.1.14
CAZyme k141_28451 k141_28451_9 9598 10788 - GH88
TF k141_28451 k141_28451_10 11163 12032 + HTH_AraC | HTH_AraC
CAZyme k141_28451 k141_28451_11 11959 16347 - PL35
Gene ID: k141_28451_1
Type: CAZyme
Location: 1 - 1194 (-)
Gene ID: k141_28451_2
Type: TC
Location: 1215 - 3053 (-)
Gene ID: k141_28451_3
Type: TF
Location: 3194 - 4225 (-)
Gene ID: k141_28451_4
Type: TF
Location: 4222 - 5226 (-)
Gene ID: k141_28451_5
Type: CAZyme
Location: 5378 - 7378 (-)
Gene ID: k141_28451_6
Type: TC
Location: 7457 - 8266 (-)
Gene ID: k141_28451_7
Type: TC
Location: 8256 - 9041 (-)
Gene ID: k141_28451_8
Type: TC
Location: 9060 - 9551 (-)
Gene ID: k141_28451_9
Type: CAZyme
Location: 9598 - 10788 (-)
Gene ID: k141_28451_10
Type: TF
Location: 11163 - 12032 (+)
Gene ID: k141_28451_11
Type: CAZyme
Location: 11959 - 16347 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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