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Cluster: SW099_7_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_67182 k141_67182_30 28602 30506 + GH154
pfam k141_67182 k141_67182_31 30503 31414 + CN_hydrolase
pfam k141_67182 k141_67182_32 31411 32196 + AP_endonuc_2
CAZyme k141_67182 k141_67182_33 32261 33223 + GH43_24
pfam k141_67182 k141_67182_34 33321 33767 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10
NULL(UNKNOWN) k141_67182 k141_67182_35 34017 34700 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_67182 k141_67182_36 34723 36918 - GH78
TC k141_67182 k141_67182_37 36972 38141 - 2.A.37.3.3
Gene ID: k141_67182_30
Type: CAZyme
Location: 28602 - 30506 (+)
Gene ID: k141_67182_31
Type: pfam
Location: 30503 - 31414 (+)
Gene ID: k141_67182_32
Type: pfam
Location: 31411 - 32196 (+)
Gene ID: k141_67182_33
Type: CAZyme
Location: 32261 - 33223 (+)
Gene ID: k141_67182_34
Type: pfam
Location: 33321 - 33767 (-)
Gene ID: k141_67182_35
Type:
Location: 34017 - 34700 (-)
Gene ID: k141_67182_36
Type: CAZyme
Location: 34723 - 36918 (-)
Gene ID: k141_67182_37
Type: TC
Location: 36972 - 38141 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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