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Cluster: SW099_7_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_239678 k141_239678_3 4167 5246 + 3.A.1.2.3
TC k141_239678 k141_239678_4 5320 6849 + 3.A.1.2.3
TC k141_239678 k141_239678_5 6871 7956 + 3.A.1.2.3
pfam k141_239678 k141_239678_6 7991 8359 + Flg_new
TF k141_239678 k141_239678_7 8472 10064 + HTH_AraC
TC k141_239678 k141_239678_8 10061 11806 + 9.B.33.1.1
TC k141_239678 k141_239678_9 11803 12765 + 3.A.1.2.27
TC k141_239678 k141_239678_10 12799 13788 + 8.A.5.1.3
STP k141_239678 k141_239678_11 14189 15562 + PALP
CAZyme k141_239678 k141_239678_12 15726 18332 + GH2
Gene ID: k141_239678_3
Type: TC
Location: 4167 - 5246 (+)
Gene ID: k141_239678_4
Type: TC
Location: 5320 - 6849 (+)
Gene ID: k141_239678_5
Type: TC
Location: 6871 - 7956 (+)
Gene ID: k141_239678_6
Type: pfam
Location: 7991 - 8359 (+)
Gene ID: k141_239678_7
Type: TF
Location: 8472 - 10064 (+)
Gene ID: k141_239678_8
Type: TC
Location: 10061 - 11806 (+)
Gene ID: k141_239678_9
Type: TC
Location: 11803 - 12765 (+)
Gene ID: k141_239678_10
Type: TC
Location: 12799 - 13788 (+)
Gene ID: k141_239678_11
Type: STP
Location: 14189 - 15562 (+)
Gene ID: k141_239678_12
Type: CAZyme
Location: 15726 - 18332 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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