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Cluster: SW097_57_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_24231 k141_24231_39 47802 48569 - GT51
TF k141_24231 k141_24231_40 48827 51154 - LacI
TC k141_24231 k141_24231_41 51506 52864 + 3.A.1.1.3
TC k141_24231 k141_24231_42 53038 53871 + 3.A.1.1.32
TC k141_24231 k141_24231_43 53887 54708 + 3.A.1.1.7
pfam k141_24231 k141_24231_44 54757 55449 + Lactamase_B | Lactamase_B_2
STP k141_24231 k141_24231_45 55565 56605 - ATPase_2
TC k141_24231 k141_24231_46 56821 57321 - 2.A.88.9.1
pfam k141_24231 k141_24231_47 57736 59115 - FAD-depend_C
TC k141_24231 k141_24231_48 59247 62843 - 4.C.1.1.4
Gene ID: k141_24231_39
Type: CAZyme
Location: 47802 - 48569 (-)
Gene ID: k141_24231_40
Type: TF
Location: 48827 - 51154 (-)
Gene ID: k141_24231_41
Type: TC
Location: 51506 - 52864 (+)
Gene ID: k141_24231_42
Type: TC
Location: 53038 - 53871 (+)
Gene ID: k141_24231_43
Type: TC
Location: 53887 - 54708 (+)
Gene ID: k141_24231_44
Type: pfam
Location: 54757 - 55449 (+)
Gene ID: k141_24231_45
Type: STP
Location: 55565 - 56605 (-)
Gene ID: k141_24231_46
Type: TC
Location: 56821 - 57321 (-)
Gene ID: k141_24231_47
Type: pfam
Location: 57736 - 59115 (-)
Gene ID: k141_24231_48
Type: TC
Location: 59247 - 62843 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_24231_43 vegetarian > omnivore 1.10509 0.04569

🧭 Explore Read Mapping of CGC

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