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Cluster: SW097_57_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_46224 k141_46224_5 3472 4713 - 2.A.66.2.10
NULL(UNKNOWN) k141_46224 k141_46224_6 4943 6268 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_46224 k141_46224_7 6285 6482 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_46224 k141_46224_8 6514 7635 - GT4
CAZyme k141_46224 k141_46224_9 7647 8726 - GT4
CAZyme k141_46224 k141_46224_10 8741 10006 - GT4
Gene ID: k141_46224_5
Type: TC
Location: 3472 - 4713 (-)
Gene ID: k141_46224_6
Type:
Location: 4943 - 6268 (-)
Gene ID: k141_46224_7
Type:
Location: 6285 - 6482 (-)
Gene ID: k141_46224_8
Type: CAZyme
Location: 6514 - 7635 (-)
Gene ID: k141_46224_9
Type: CAZyme
Location: 7647 - 8726 (-)
Gene ID: k141_46224_10
Type: CAZyme
Location: 8741 - 10006 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_46224_7 vegan > omnivore 18.67609 0.02973

🧭 Explore Read Mapping of CGC

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