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Cluster: SW097_57_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_70951 k141_70951_38 48936 49832 + 3.A.1.1.29
peptidase k141_70951 k141_70951_39 49880 51385 + S12.UPW
CAZyme k141_70951 k141_70951_40 51419 52819 + GH13_18
pfam k141_70951 k141_70951_41 53170 54174 + Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_3
NULL(UNKNOWN) k141_70951 k141_70951_42 54228 56120 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_70951 k141_70951_43 56204 57046 - 9.B.143.2.3
TC k141_70951 k141_70951_44 57223 57630 - 4.A.6.1.19
NULL(UNKNOWN) k141_70951 k141_70951_45 57695 58918 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_70951 k141_70951_46 59043 59864 - 4.A.6.1.13
TC k141_70951 k141_70951_47 59857 60627 - 4.A.6.1.13
TC k141_70951 k141_70951_48 60645 61130 - 4.A.6.1.3
Gene ID: k141_70951_38
Type: TC
Location: 48936 - 49832 (+)
Gene ID: k141_70951_39
Type: peptidase
Location: 49880 - 51385 (+)
Gene ID: k141_70951_40
Type: CAZyme
Location: 51419 - 52819 (+)
Gene ID: k141_70951_41
Type: pfam
Location: 53170 - 54174 (+)
Gene ID: k141_70951_42
Type:
Location: 54228 - 56120 (+)
Gene ID: k141_70951_43
Type: TC
Location: 56204 - 57046 (-)
Gene ID: k141_70951_44
Type: TC
Location: 57223 - 57630 (-)
Gene ID: k141_70951_45
Type:
Location: 57695 - 58918 (-)
Gene ID: k141_70951_46
Type: TC
Location: 59043 - 59864 (-)
Gene ID: k141_70951_47
Type: TC
Location: 59857 - 60627 (-)
Gene ID: k141_70951_48
Type: TC
Location: 60645 - 61130 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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