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Cluster: SW095_maxbin.019_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42784 k141_42784_186 190531 191652 - 9.B.10.1.1
TC k141_42784 k141_42784_187 191725 193209 - 2.A.25.1.3
TF k141_42784 k141_42784_188 193360 193902 - SpoVT_AbrB
CAZyme k141_42784 k141_42784_189 194323 196293 + CBM48 | GH13_9
pfam k141_42784 k141_42784_190 196290 197501 + NTP_transferase | Hexapep_GlmU
pfam k141_42784 k141_42784_191 197498 198610 + NTP_transferase | Hexapep_GlmU
CAZyme k141_42784 k141_42784_192 198725 200749 + GT5
CAZyme k141_42784 k141_42784_193 200768 203194 + GT35
TF k141_42784 k141_42784_194 203379 203594 - HTH_3
TC k141_42784 k141_42784_195 203911 205065 + 3.A.18.1.1
TC k141_42784 k141_42784_196 205275 206951 + 3.A.1.5.2
Gene ID: k141_42784_186
Type: TC
Location: 190531 - 191652 (-)
Gene ID: k141_42784_187
Type: TC
Location: 191725 - 193209 (-)
Gene ID: k141_42784_188
Type: TF
Location: 193360 - 193902 (-)
Gene ID: k141_42784_189
Type: CAZyme
Location: 194323 - 196293 (+)
Gene ID: k141_42784_190
Type: pfam
Location: 196290 - 197501 (+)
Gene ID: k141_42784_191
Type: pfam
Location: 197498 - 198610 (+)
Gene ID: k141_42784_192
Type: CAZyme
Location: 198725 - 200749 (+)
Gene ID: k141_42784_193
Type: CAZyme
Location: 200768 - 203194 (+)
Gene ID: k141_42784_194
Type: TF
Location: 203379 - 203594 (-)
Gene ID: k141_42784_195
Type: TC
Location: 203911 - 205065 (+)
Gene ID: k141_42784_196
Type: TC
Location: 205275 - 206951 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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