Cluster: SW085_bin.20_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SW085_bin.20
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_93910 | k141_93910_24 | 31953 | 34280 | - | 9.A.8.1.6 |
| TC | k141_93910 | k141_93910_25 | 34404 | 34625 | - | 9.A.8.1.6 |
| STP | k141_93910 | k141_93910_26 | 34665 | 34907 | - | FeoA |
| STP | k141_93910 | k141_93910_27 | 35096 | 35344 | - | PTS-HPr |
| TC | k141_93910 | k141_93910_28 | 35767 | 37230 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | k141_93910 | k141_93910_29 | 37384 | 37839 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_93910 | k141_93910_30 | 37843 | 40851 | - | GH2 |
Gene ID: k141_93910_24
Type: TC
Location: 31953 - 34280 (-)
Type: TC
Location: 31953 - 34280 (-)
Gene ID: k141_93910_25
Type: TC
Location: 34404 - 34625 (-)
Type: TC
Location: 34404 - 34625 (-)
Gene ID: k141_93910_26
Type: STP
Location: 34665 - 34907 (-)
Type: STP
Location: 34665 - 34907 (-)
Gene ID: k141_93910_27
Type: STP
Location: 35096 - 35344 (-)
Type: STP
Location: 35096 - 35344 (-)
Gene ID: k141_93910_28
Type: TC
Location: 35767 - 37230 (-)
Type: TC
Location: 35767 - 37230 (-)
Gene ID: k141_93910_29
Type:
Location: 37384 - 37839 (-)
Type:
Location: 37384 - 37839 (-)
Gene ID: k141_93910_30
Type: CAZyme
Location: 37843 - 40851 (-)
Type: CAZyme
Location: 37843 - 40851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.