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Cluster: SW081_bin.1_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_105571 k141_105571_42 54329 55372 - GH179
pfam k141_105571 k141_105571_43 55372 56121 - ThuA
TF k141_105571 k141_105571_44 56230 57162 + HTH_AraC | HTH_AraC
TC k141_105571 k141_105571_45 57188 59059 - 2.A.3.3.13
pfam k141_105571 k141_105571_46 59165 60115 - CBS | CNNM
pfam k141_105571 k141_105571_47 60195 60686 - DUF2062
TC k141_105571 k141_105571_48 60683 62371 - 2.A.58.2.2
NULL(UNKNOWN) k141_105571 k141_105571_49 62812 63270 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_105571 k141_105571_50 63553 65049 + 2.A.36.6.5
Gene ID: k141_105571_42
Type: CAZyme
Location: 54329 - 55372 (-)
Gene ID: k141_105571_43
Type: pfam
Location: 55372 - 56121 (-)
Gene ID: k141_105571_44
Type: TF
Location: 56230 - 57162 (+)
Gene ID: k141_105571_45
Type: TC
Location: 57188 - 59059 (-)
Gene ID: k141_105571_46
Type: pfam
Location: 59165 - 60115 (-)
Gene ID: k141_105571_47
Type: pfam
Location: 60195 - 60686 (-)
Gene ID: k141_105571_48
Type: TC
Location: 60683 - 62371 (-)
Gene ID: k141_105571_49
Type:
Location: 62812 - 63270 (-)
Gene ID: k141_105571_50
Type: TC
Location: 63553 - 65049 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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