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Cluster: SW079_maxbin.018_sub_CGC78

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_48439 k141_48439_43 70573 73710 - 1.B.14.6.1
TF k141_48439 k141_48439_44 74045 78070 - HTH_AraC
NULL(UNKNOWN) k141_48439 k141_48439_45 78447 78962 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_48439 k141_48439_46 78963 80192 - GH88
CAZyme k141_48439 k141_48439_47 80203 82620 - PL12
pfam k141_48439 k141_48439_48 82623 83882 - Alginate_lyase
NULL(UNKNOWN) k141_48439 k141_48439_49 83891 86362 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_48439 k141_48439_50 86439 88124 - 8.A.46.3.2
TC k141_48439 k141_48439_51 88138 91437 - 1.B.14.6.1
Gene ID: k141_48439_43
Type: TC
Location: 70573 - 73710 (-)
Gene ID: k141_48439_44
Type: TF
Location: 74045 - 78070 (-)
Gene ID: k141_48439_45
Type:
Location: 78447 - 78962 (+)
Gene ID: k141_48439_46
Type: CAZyme
Location: 78963 - 80192 (-)
Gene ID: k141_48439_47
Type: CAZyme
Location: 80203 - 82620 (-)
Gene ID: k141_48439_48
Type: pfam
Location: 82623 - 83882 (-)
Gene ID: k141_48439_49
Type:
Location: 83891 - 86362 (-)
Gene ID: k141_48439_50
Type: TC
Location: 86439 - 88124 (-)
Gene ID: k141_48439_51
Type: TC
Location: 88138 - 91437 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_48439_44 vegan > omnivore 1.10240 0.00631
k141_48439_44 vegetarian > omnivore 1.51135 0.01244

🧭 Explore Read Mapping of CGC

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