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Cluster: SW079_maxbin.018_sub_CGC76

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_43822 k141_43822_23 28560 29540 + GH43_2
sulfatase k141_43822 k141_43822_24 29578 29916 + S1_7
TC k141_43822 k141_43822_25 30711 33815 + 1.B.14.6.1
pfam k141_43822 k141_43822_26 33836 35545 + SusD_RagB | SusD-like_3
pfam k141_43822 k141_43822_27 35558 36949 + DUF4960
CAZyme k141_43822 k141_43822_28 36978 38567 + GH32
CAZyme k141_43822 k141_43822_29 38703 40532 + GH32
TC k141_43822 k141_43822_30 40634 41800 + 2.A.1.7.17
Gene ID: k141_43822_23
Type: CAZyme
Location: 28560 - 29540 (+)
Gene ID: k141_43822_24
Type: sulfatase
Location: 29578 - 29916 (+)
Gene ID: k141_43822_25
Type: TC
Location: 30711 - 33815 (+)
Gene ID: k141_43822_26
Type: pfam
Location: 33836 - 35545 (+)
Gene ID: k141_43822_27
Type: pfam
Location: 35558 - 36949 (+)
Gene ID: k141_43822_28
Type: CAZyme
Location: 36978 - 38567 (+)
Gene ID: k141_43822_29
Type: CAZyme
Location: 38703 - 40532 (+)
Gene ID: k141_43822_30
Type: TC
Location: 40634 - 41800 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_43822_23 vegan > omnivore 1.01548 0.00631

🧭 Explore Read Mapping of CGC

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