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Cluster: SW079_maxbin.018_sub_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_86056 k141_86056_7 9986 11221 + GH88
TF k141_86056 k141_86056_8 11345 15430 + HTH_AraC
CAZyme k141_86056 k141_86056_9 15590 17011 + GH29
TC k141_86056 k141_86056_10 17046 20291 + 1.B.14.6.1
pfam k141_86056 k141_86056_11 20302 22074 + SusD_RagB | SusD-like_3
TC k141_86056 k141_86056_12 22099 25080 + 1.B.14.6.13
pfam k141_86056 k141_86056_13 25093 26781 + SusD_RagB | SusD-like_3
CAZyme k141_86056 k141_86056_14 26771 28921 + PL12_2
CAZyme k141_86056 k141_86056_15 29155 31515 + GH141
pfam k141_86056 k141_86056_16 31545 32996 - GHL10 | DUF4015
TC k141_86056 k141_86056_17 33106 34536 + 2.A.114.1.4
Gene ID: k141_86056_7
Type: CAZyme
Location: 9986 - 11221 (+)
Gene ID: k141_86056_8
Type: TF
Location: 11345 - 15430 (+)
Gene ID: k141_86056_9
Type: CAZyme
Location: 15590 - 17011 (+)
Gene ID: k141_86056_10
Type: TC
Location: 17046 - 20291 (+)
Gene ID: k141_86056_11
Type: pfam
Location: 20302 - 22074 (+)
Gene ID: k141_86056_12
Type: TC
Location: 22099 - 25080 (+)
Gene ID: k141_86056_13
Type: pfam
Location: 25093 - 26781 (+)
Gene ID: k141_86056_14
Type: CAZyme
Location: 26771 - 28921 (+)
Gene ID: k141_86056_15
Type: CAZyme
Location: 29155 - 31515 (+)
Gene ID: k141_86056_16
Type: pfam
Location: 31545 - 32996 (-)
Gene ID: k141_86056_17
Type: TC
Location: 33106 - 34536 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_86056_15 vegan > omnivore 1.01902 0.00631

🧭 Explore Read Mapping of CGC

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