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Cluster: SW079_maxbin.018_sub_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_107248 k141_107248_15 23785 26769 + GH115
CAZyme k141_107248 k141_107248_16 26826 28868 + GH43_35
STP k141_107248 k141_107248_17 29020 29832 - SIS
NULL(UNKNOWN) k141_107248 k141_107248_18 29864 30715 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_107248 k141_107248_19 30761 32044 - 2.A.1.25.5
pfam k141_107248 k141_107248_20 32060 33391 - SpoIID
CAZyme k141_107248 k141_107248_21 33388 35853 - GT2
NULL(UNKNOWN) k141_107248 k141_107248_22 35967 37232 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_107248 k141_107248_23 37397 38404 - Semialdhyde_dh | Semialdhyde_dhC
TC k141_107248 k141_107248_24 38605 40740 + 2.A.37.2.5
TC k141_107248 k141_107248_25 40722 41456 + 3.A.16.1.3
TC k141_107248 k141_107248_26 41465 42121 + 3.A.1.122.2
pfam k141_107248 k141_107248_27 42305 43219 - HHH_3 | HHH_3 | HHH_3
TC k141_107248 k141_107248_28 43219 44589 - 2.A.22.5.3
Gene ID: k141_107248_15
Type: CAZyme
Location: 23785 - 26769 (+)
Gene ID: k141_107248_16
Type: CAZyme
Location: 26826 - 28868 (+)
Gene ID: k141_107248_17
Type: STP
Location: 29020 - 29832 (-)
Gene ID: k141_107248_18
Type:
Location: 29864 - 30715 (-)
Gene ID: k141_107248_19
Type: TC
Location: 30761 - 32044 (-)
Gene ID: k141_107248_20
Type: pfam
Location: 32060 - 33391 (-)
Gene ID: k141_107248_21
Type: CAZyme
Location: 33388 - 35853 (-)
Gene ID: k141_107248_22
Type:
Location: 35967 - 37232 (-)
Gene ID: k141_107248_23
Type: pfam
Location: 37397 - 38404 (-)
Gene ID: k141_107248_24
Type: TC
Location: 38605 - 40740 (+)
Gene ID: k141_107248_25
Type: TC
Location: 40722 - 41456 (+)
Gene ID: k141_107248_26
Type: TC
Location: 41465 - 42121 (+)
Gene ID: k141_107248_27
Type: pfam
Location: 42305 - 43219 (-)
Gene ID: k141_107248_28
Type: TC
Location: 43219 - 44589 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_107248_21 vegetarian > vegan 1.14364 0.04643

🧭 Explore Read Mapping of CGC

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