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Cluster: SW079_maxbin.018_sub_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_89390 k141_89390_30 34464 35900 + 2.A.1.1.55
pfam k141_89390 k141_89390_31 35919 39200 + TPR_8 | DUF5107
CAZyme k141_89390 k141_89390_32 39307 40902 + CBM61 | GH53
NULL(UNKNOWN) k141_89390 k141_89390_33 40915 42276 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_89390 k141_89390_34 42289 45381 + 1.B.14.6.1
pfam k141_89390 k141_89390_35 45394 46905 + SusD_RagB | SusD-like_3
CAZyme k141_89390 k141_89390_36 46941 49283 + GH35
CAZyme k141_89390 k141_89390_37 49289 51784 + GH147
CAZyme k141_89390 k141_89390_38 51872 54991 - GH3
Gene ID: k141_89390_30
Type: TC
Location: 34464 - 35900 (+)
Gene ID: k141_89390_31
Type: pfam
Location: 35919 - 39200 (+)
Gene ID: k141_89390_32
Type: CAZyme
Location: 39307 - 40902 (+)
Gene ID: k141_89390_33
Type:
Location: 40915 - 42276 (+)
Gene ID: k141_89390_34
Type: TC
Location: 42289 - 45381 (+)
Gene ID: k141_89390_35
Type: pfam
Location: 45394 - 46905 (+)
Gene ID: k141_89390_36
Type: CAZyme
Location: 46941 - 49283 (+)
Gene ID: k141_89390_37
Type: CAZyme
Location: 49289 - 51784 (+)
Gene ID: k141_89390_38
Type: CAZyme
Location: 51872 - 54991 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_89390_34 vegetarian > omnivore 1.10473 0.01244

🧭 Explore Read Mapping of CGC

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