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Cluster: SW079_maxbin.018_sub_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_42893 k141_42893_23 23082 24071 - GH43_29
CAZyme k141_42893 k141_42893_24 24080 26062 - GH51_2
CAZyme k141_42893 k141_42893_25 26087 27607 - GH43_4
TF k141_42893 k141_42893_26 27785 32050 + HTH_AraC
CAZyme k141_42893 k141_42893_27 32149 34137 - GH43_4
pfam k141_42893 k141_42893_28 34163 35980 - SusD_RagB | SusD-like_3
TC k141_42893 k141_42893_29 35993 39187 - 1.B.14.6.2
pfam k141_42893 k141_42893_30 39209 41056 - SusD_RagB | SusD-like_3
TC k141_42893 k141_42893_31 41069 44200 - 1.B.14.6.1
Gene ID: k141_42893_23
Type: CAZyme
Location: 23082 - 24071 (-)
Gene ID: k141_42893_24
Type: CAZyme
Location: 24080 - 26062 (-)
Gene ID: k141_42893_25
Type: CAZyme
Location: 26087 - 27607 (-)
Gene ID: k141_42893_26
Type: TF
Location: 27785 - 32050 (+)
Gene ID: k141_42893_27
Type: CAZyme
Location: 32149 - 34137 (-)
Gene ID: k141_42893_28
Type: pfam
Location: 34163 - 35980 (-)
Gene ID: k141_42893_29
Type: TC
Location: 35993 - 39187 (-)
Gene ID: k141_42893_30
Type: pfam
Location: 39209 - 41056 (-)
Gene ID: k141_42893_31
Type: TC
Location: 41069 - 44200 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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