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Cluster: SW079_maxbin.018_sub_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_94241 k141_94241_19 20346 21512 - GH117 | GH117
TF k141_94241 k141_94241_20 21598 25725 - HTH_AraC
CAZyme k141_94241 k141_94241_21 25849 27072 + GH88
TC k141_94241 k141_94241_22 27093 30257 + 1.B.14.6.1
TC k141_94241 k141_94241_23 30284 31909 + 8.A.46.1.3
pfam k141_94241 k141_94241_24 31936 32889 + PKD | DUF5017
CAZyme k141_94241 k141_94241_25 32886 35330 + PL30
pfam k141_94241 k141_94241_26 35357 36859 + Mfa_like_1
pfam k141_94241 k141_94241_27 36882 37703 + Mfa_like_1
CAZyme k141_94241 k141_94241_28 37722 39611 + GH29
CAZyme k141_94241 k141_94241_29 39623 41263 + PL29
Gene ID: k141_94241_19
Type: CAZyme
Location: 20346 - 21512 (-)
Gene ID: k141_94241_20
Type: TF
Location: 21598 - 25725 (-)
Gene ID: k141_94241_21
Type: CAZyme
Location: 25849 - 27072 (+)
Gene ID: k141_94241_22
Type: TC
Location: 27093 - 30257 (+)
Gene ID: k141_94241_23
Type: TC
Location: 30284 - 31909 (+)
Gene ID: k141_94241_24
Type: pfam
Location: 31936 - 32889 (+)
Gene ID: k141_94241_25
Type: CAZyme
Location: 32886 - 35330 (+)
Gene ID: k141_94241_26
Type: pfam
Location: 35357 - 36859 (+)
Gene ID: k141_94241_27
Type: pfam
Location: 36882 - 37703 (+)
Gene ID: k141_94241_28
Type: CAZyme
Location: 37722 - 39611 (+)
Gene ID: k141_94241_29
Type: CAZyme
Location: 39623 - 41263 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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