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Cluster: SW079_maxbin.018_sub_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17422 k141_17422_22 19712 20836 + 1.I.1.1.3
TF k141_17422 k141_17422_23 20891 21337 + CSD
NULL(UNKNOWN) k141_17422 k141_17422_24 21534 21683 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_17422 k141_17422_25 21729 23669 - CE20 | CE20
CAZyme k141_17422 k141_17422_26 23705 25744 - GH67
Gene ID: k141_17422_22
Type: TC
Location: 19712 - 20836 (+)
Gene ID: k141_17422_23
Type: TF
Location: 20891 - 21337 (+)
Gene ID: k141_17422_24
Type:
Location: 21534 - 21683 (-)
Gene ID: k141_17422_25
Type: CAZyme
Location: 21729 - 23669 (-)
Gene ID: k141_17422_26
Type: CAZyme
Location: 23705 - 25744 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_17422_24 vegan > omnivore 2.56319 0.00631

🧭 Explore Read Mapping of CGC

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