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Cluster: SW079_maxbin.018_sub_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_27147 k141_27147_43 51806 54952 + 1.B.14.6.1
pfam k141_27147 k141_27147_44 54980 57025 + SusD_RagB
pfam k141_27147 k141_27147_45 57047 57565 + BT_3987-like_N
CAZyme k141_27147 k141_27147_46 57753 59567 + GH2
CAZyme k141_27147 k141_27147_47 59549 60676 + GH105
CAZyme k141_27147 k141_27147_48 60770 62008 + GH154
sulfatase k141_27147 k141_27147_49 62027 62998 + S1_16
CAZyme k141_27147 k141_27147_50 63191 64324 + GH88
CAZyme k141_27147 k141_27147_51 64339 68973 + GH106 | GH43_26
CAZyme k141_27147 k141_27147_52 69018 70952 + GH146
pfam k141_27147 k141_27147_53 71000 72454 + Arabinose_Iso_C | AraA_central
CAZyme k141_27147 k141_27147_54 72592 74625 + GH182
Gene ID: k141_27147_43
Type: TC
Location: 51806 - 54952 (+)
Gene ID: k141_27147_44
Type: pfam
Location: 54980 - 57025 (+)
Gene ID: k141_27147_45
Type: pfam
Location: 57047 - 57565 (+)
Gene ID: k141_27147_46
Type: CAZyme
Location: 57753 - 59567 (+)
Gene ID: k141_27147_47
Type: CAZyme
Location: 59549 - 60676 (+)
Gene ID: k141_27147_48
Type: CAZyme
Location: 60770 - 62008 (+)
Gene ID: k141_27147_49
Type: sulfatase
Location: 62027 - 62998 (+)
Gene ID: k141_27147_50
Type: CAZyme
Location: 63191 - 64324 (+)
Gene ID: k141_27147_51
Type: CAZyme
Location: 64339 - 68973 (+)
Gene ID: k141_27147_52
Type: CAZyme
Location: 69018 - 70952 (+)
Gene ID: k141_27147_53
Type: pfam
Location: 71000 - 72454 (+)
Gene ID: k141_27147_54
Type: CAZyme
Location: 72592 - 74625 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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