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Cluster: SW079_maxbin.018_sub_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_27147 k141_27147_1 108 1496 - 1.B.14.6.1
CAZyme k141_27147 k141_27147_2 1617 2594 - GH5_2
CAZyme k141_27147 k141_27147_3 2906 4903 + GH172
TC k141_27147 k141_27147_4 4900 5892 - 2.A.19.5.2
TC k141_27147 k141_27147_5 6049 7872 + 1.A.23.1.4
pfam k141_27147 k141_27147_6 7976 8914 - Metallophos
TC k141_27147 k141_27147_7 9004 11814 - 1.B.14.12.1
Gene ID: k141_27147_1
Type: TC
Location: 108 - 1496 (-)
Gene ID: k141_27147_2
Type: CAZyme
Location: 1617 - 2594 (-)
Gene ID: k141_27147_3
Type: CAZyme
Location: 2906 - 4903 (+)
Gene ID: k141_27147_4
Type: TC
Location: 4900 - 5892 (-)
Gene ID: k141_27147_5
Type: TC
Location: 6049 - 7872 (+)
Gene ID: k141_27147_6
Type: pfam
Location: 7976 - 8914 (-)
Gene ID: k141_27147_7
Type: TC
Location: 9004 - 11814 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_27147_2 vegan > omnivore 2.03533 0.00631
k141_27147_3 vegan > omnivore 1.35835 0.00631

🧭 Explore Read Mapping of CGC

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