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Cluster: SW076_bin.15_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_77547 k141_77547_1 2 2194 + 1.I.1.1.3
STP k141_77547 k141_77547_2 2816 3577 + Fer4
TC k141_77547 k141_77547_3 3858 4370 + 4.A.1.2.5
pfam k141_77547 k141_77547_4 4377 5243 + PRD | PRD | CAT_RBD
TC k141_77547 k141_77547_5 5343 6959 + 4.A.1.1.3
CAZyme k141_77547 k141_77547_6 6963 8345 + GH4
STP k141_77547 k141_77547_7 8602 10434 + Pyr_redox_2
TC k141_77547 k141_77547_8 10428 12239 + 3.D.1.5.1
pfam k141_77547 k141_77547_9 12242 13300 + NMT1
TC k141_77547 k141_77547_10 13304 14680 + 3.A.1.17.6
Gene ID: k141_77547_1
Type: TC
Location: 2 - 2194 (+)
Gene ID: k141_77547_2
Type: STP
Location: 2816 - 3577 (+)
Gene ID: k141_77547_3
Type: TC
Location: 3858 - 4370 (+)
Gene ID: k141_77547_4
Type: pfam
Location: 4377 - 5243 (+)
Gene ID: k141_77547_5
Type: TC
Location: 5343 - 6959 (+)
Gene ID: k141_77547_6
Type: CAZyme
Location: 6963 - 8345 (+)
Gene ID: k141_77547_7
Type: STP
Location: 8602 - 10434 (+)
Gene ID: k141_77547_8
Type: TC
Location: 10428 - 12239 (+)
Gene ID: k141_77547_9
Type: pfam
Location: 12242 - 13300 (+)
Gene ID: k141_77547_10
Type: TC
Location: 13304 - 14680 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_77547_10 vegan > omnivore 1.07429 0.01882

🧭 Explore Read Mapping of CGC

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