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Cluster: SW076_bin.15_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_192467 k141_192467_10 9529 10905 - GH13_20
TC k141_192467 k141_192467_11 11372 12568 - 2.A.1.2.18
NULL(UNKNOWN) k141_192467 k141_192467_12 12743 13495 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_192467 k141_192467_13 13661 15034 - GH4
TF k141_192467 k141_192467_14 15209 15961 + HTH_6
TC k141_192467 k141_192467_15 16024 17688 - 4.A.1.1.3
TC k141_192467 k141_192467_16 18003 20363 - 9.A.8.1.6
TC k141_192467 k141_192467_17 21061 22524 - 2.A.3.2.3
Gene ID: k141_192467_10
Type: CAZyme
Location: 9529 - 10905 (-)
Gene ID: k141_192467_11
Type: TC
Location: 11372 - 12568 (-)
Gene ID: k141_192467_12
Type:
Location: 12743 - 13495 (-)
Gene ID: k141_192467_13
Type: CAZyme
Location: 13661 - 15034 (-)
Gene ID: k141_192467_14
Type: TF
Location: 15209 - 15961 (+)
Gene ID: k141_192467_15
Type: TC
Location: 16024 - 17688 (-)
Gene ID: k141_192467_16
Type: TC
Location: 18003 - 20363 (-)
Gene ID: k141_192467_17
Type: TC
Location: 21061 - 22524 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_192467_12 vegan > omnivore 1.67774 0.01882
k141_192467_13 vegan > omnivore 1.42304 0.01882
k141_192467_17 vegan > omnivore 1.29686 0.01882

🧭 Explore Read Mapping of CGC

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