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Cluster: SW076_bin.15_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_136105 k141_136105_12 12487 12825 - 4.A.3.1.2
TF k141_136105 k141_136105_13 13039 14043 - LacI
TC k141_136105 k141_136105_14 14400 16175 + 4.A.3.1.1
CAZyme k141_136105 k141_136105_15 16242 17681 + GH1
TF k141_136105 k141_136105_16 17944 18981 - LacI
CAZyme k141_136105 k141_136105_17 19323 20765 + GH1
TC k141_136105 k141_136105_18 20942 22702 + 4.A.3.1.1
TF k141_136105 k141_136105_19 23040 24050 - LacI
TC k141_136105 k141_136105_20 24325 26103 + 4.A.3.1.1
CAZyme k141_136105 k141_136105_21 26179 27600 + GH1
pfam k141_136105 k141_136105_22 27968 29200 + Fic
STP k141_136105 k141_136105_23 29249 29578 - DeoRC
TC k141_136105 k141_136105_24 29741 31435 - 4.A.3.1.1
Gene ID: k141_136105_12
Type: TC
Location: 12487 - 12825 (-)
Gene ID: k141_136105_13
Type: TF
Location: 13039 - 14043 (-)
Gene ID: k141_136105_14
Type: TC
Location: 14400 - 16175 (+)
Gene ID: k141_136105_15
Type: CAZyme
Location: 16242 - 17681 (+)
Gene ID: k141_136105_16
Type: TF
Location: 17944 - 18981 (-)
Gene ID: k141_136105_17
Type: CAZyme
Location: 19323 - 20765 (+)
Gene ID: k141_136105_18
Type: TC
Location: 20942 - 22702 (+)
Gene ID: k141_136105_19
Type: TF
Location: 23040 - 24050 (-)
Gene ID: k141_136105_20
Type: TC
Location: 24325 - 26103 (+)
Gene ID: k141_136105_21
Type: CAZyme
Location: 26179 - 27600 (+)
Gene ID: k141_136105_22
Type: pfam
Location: 27968 - 29200 (+)
Gene ID: k141_136105_23
Type: STP
Location: 29249 - 29578 (-)
Gene ID: k141_136105_24
Type: TC
Location: 29741 - 31435 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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