Cluster: SW074_32_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: SW074_32
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_30164 | k141_30164_38 | 40974 | 41417 | + | 4.A.6.1.16 |
| pfam | k141_30164 | k141_30164_39 | 41417 | 41698 | + | YajC |
| TC | k141_30164 | k141_30164_40 | 41735 | 42217 | + | 4.A.6.1.4 |
| TC | k141_30164 | k141_30164_41 | 42308 | 43108 | + | 4.A.6.1.4 |
| TC | k141_30164 | k141_30164_42 | 43098 | 44180 | + | 4.A.6.1.4 |
| TF | k141_30164 | k141_30164_43 | 44366 | 45097 | + | GntR |
| STP | k141_30164 | k141_30164_44 | 45212 | 46378 | + | SIS | SIS |
| CAZyme | k141_30164 | k141_30164_45 | 46496 | 47665 | + | CE9 |
Gene ID: k141_30164_38
Type: TC
Location: 40974 - 41417 (+)
Type: TC
Location: 40974 - 41417 (+)
Gene ID: k141_30164_39
Type: pfam
Location: 41417 - 41698 (+)
Type: pfam
Location: 41417 - 41698 (+)
Gene ID: k141_30164_40
Type: TC
Location: 41735 - 42217 (+)
Type: TC
Location: 41735 - 42217 (+)
Gene ID: k141_30164_41
Type: TC
Location: 42308 - 43108 (+)
Type: TC
Location: 42308 - 43108 (+)
Gene ID: k141_30164_42
Type: TC
Location: 43098 - 44180 (+)
Type: TC
Location: 43098 - 44180 (+)
Gene ID: k141_30164_43
Type: TF
Location: 44366 - 45097 (+)
Type: TF
Location: 44366 - 45097 (+)
Gene ID: k141_30164_44
Type: STP
Location: 45212 - 46378 (+)
Type: STP
Location: 45212 - 46378 (+)
Gene ID: k141_30164_45
Type: CAZyme
Location: 46496 - 47665 (+)
Type: CAZyme
Location: 46496 - 47665 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.