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Cluster: SW073_bin.10_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_343157 k141_343157_3 5421 8042 + GH43_32
STP k141_343157 k141_343157_4 8058 9542 + SBP_bac_1
TC k141_343157 k141_343157_5 9571 10557 + 3.A.1.1.11
TC k141_343157 k141_343157_6 10567 11472 + 3.A.1.1.34
CAZyme k141_343157 k141_343157_7 11472 13250 + GH2
CAZyme k141_343157 k141_343157_8 13298 14413 + GH5_13
CAZyme k141_343157 k141_343157_9 14410 15630 + CE2
Gene ID: k141_343157_3
Type: CAZyme
Location: 5421 - 8042 (+)
Gene ID: k141_343157_4
Type: STP
Location: 8058 - 9542 (+)
Gene ID: k141_343157_5
Type: TC
Location: 9571 - 10557 (+)
Gene ID: k141_343157_6
Type: TC
Location: 10567 - 11472 (+)
Gene ID: k141_343157_7
Type: CAZyme
Location: 11472 - 13250 (+)
Gene ID: k141_343157_8
Type: CAZyme
Location: 13298 - 14413 (+)
Gene ID: k141_343157_9
Type: CAZyme
Location: 14410 - 15630 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_343157_8 vegetarian > vegan 1.41590 0.00565

🧭 Explore Read Mapping of CGC

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