dbCAN Logo

Cluster: SW073_bin.10_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_145830 k141_145830_13 15793 17514 + GH43
NULL(UNKNOWN) k141_145830 k141_145830_14 17511 19013 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_145830 k141_145830_15 19023 20969 + SBP_bac_1
TC k141_145830 k141_145830_16 20994 21887 + 3.A.1.1.11
TC k141_145830 k141_145830_17 21874 22764 + 3.A.1.1.34
Gene ID: k141_145830_13
Type: CAZyme
Location: 15793 - 17514 (+)
Gene ID: k141_145830_14
Type:
Location: 17511 - 19013 (+)
Gene ID: k141_145830_15
Type: STP
Location: 19023 - 20969 (+)
Gene ID: k141_145830_16
Type: TC
Location: 20994 - 21887 (+)
Gene ID: k141_145830_17
Type: TC
Location: 21874 - 22764 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_145830_13 vegetarian > vegan 4.70533 0.00565
k141_145830_14 vegetarian > vegan 5.47317 0.00565
k141_145830_15 vegetarian > vegan 21.51378 0.00565
k141_145830_16 vegetarian > vegan 21.70811 0.00565
k141_145830_17 vegetarian > vegan 3.19294 0.00565

🧭 Explore Read Mapping of CGC

← Back to Cluster List