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Cluster: SW073_bin.10_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_129635 k141_129635_64 85797 87191 - GH13
TF k141_129635 k141_129635_65 87328 88089 + HTH_AraC | HTH_AraC
TC k141_129635 k141_129635_66 88382 89122 + 9.B.18.1.2
pfam k141_129635 k141_129635_67 89119 89994 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme k141_129635 k141_129635_68 89987 91102 + GT4
pfam k141_129635 k141_129635_69 91095 92162 + Sulfotransfer_1
CAZyme k141_129635 k141_129635_70 92173 93201 + GT2
CAZyme k141_129635 k141_129635_71 93188 94261 + GT4
pfam k141_129635 k141_129635_72 94262 95728 + O-ag_pol_Wzy
TC k141_129635 k141_129635_73 95715 97244 + 2.A.66.1.40
Gene ID: k141_129635_64
Type: CAZyme
Location: 85797 - 87191 (-)
Gene ID: k141_129635_65
Type: TF
Location: 87328 - 88089 (+)
Gene ID: k141_129635_66
Type: TC
Location: 88382 - 89122 (+)
Gene ID: k141_129635_67
Type: pfam
Location: 89119 - 89994 (+)
Gene ID: k141_129635_68
Type: CAZyme
Location: 89987 - 91102 (+)
Gene ID: k141_129635_69
Type: pfam
Location: 91095 - 92162 (+)
Gene ID: k141_129635_70
Type: CAZyme
Location: 92173 - 93201 (+)
Gene ID: k141_129635_71
Type: CAZyme
Location: 93188 - 94261 (+)
Gene ID: k141_129635_72
Type: pfam
Location: 94262 - 95728 (+)
Gene ID: k141_129635_73
Type: TC
Location: 95715 - 97244 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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