dbCAN Logo

Cluster: SW073_bin.10_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_263443 k141_263443_2 1477 2499 + 2.A.7.3.52
pfam k141_263443 k141_263443_3 2529 3038 + Pro_isomerase
pfam k141_263443 k141_263443_4 3035 3547 + QueT
TC k141_263443 k141_263443_5 3547 4494 + 2.A.119.2.2
pfam k141_263443 k141_263443_6 4497 5198 + ThiF
NULL(UNKNOWN) k141_263443 k141_263443_7 5397 8225 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_263443 k141_263443_8 9035 11161 + GH3
CAZyme k141_263443 k141_263443_9 11227 12147 - GH43_17
Gene ID: k141_263443_2
Type: TC
Location: 1477 - 2499 (+)
Gene ID: k141_263443_3
Type: pfam
Location: 2529 - 3038 (+)
Gene ID: k141_263443_4
Type: pfam
Location: 3035 - 3547 (+)
Gene ID: k141_263443_5
Type: TC
Location: 3547 - 4494 (+)
Gene ID: k141_263443_6
Type: pfam
Location: 4497 - 5198 (+)
Gene ID: k141_263443_7
Type:
Location: 5397 - 8225 (+)
Gene ID: k141_263443_8
Type: CAZyme
Location: 9035 - 11161 (+)
Gene ID: k141_263443_9
Type: CAZyme
Location: 11227 - 12147 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List