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Cluster: SW073_bin.10_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_129635 k141_129635_50 62856 64742 + GH163
CAZyme k141_129635 k141_129635_51 64868 66457 + GH20
CAZyme k141_129635 k141_129635_52 66690 68570 + GH78
TF k141_129635 k141_129635_53 68679 69560 - HTH_AraC
NULL(UNKNOWN) k141_129635 k141_129635_54 69984 71387 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_129635 k141_129635_55 71397 72380 + 3.A.1.1.10
TC k141_129635 k141_129635_56 72394 73293 + 3.A.1.1.34
Gene ID: k141_129635_50
Type: CAZyme
Location: 62856 - 64742 (+)
Gene ID: k141_129635_51
Type: CAZyme
Location: 64868 - 66457 (+)
Gene ID: k141_129635_52
Type: CAZyme
Location: 66690 - 68570 (+)
Gene ID: k141_129635_53
Type: TF
Location: 68679 - 69560 (-)
Gene ID: k141_129635_54
Type:
Location: 69984 - 71387 (+)
Gene ID: k141_129635_55
Type: TC
Location: 71397 - 72380 (+)
Gene ID: k141_129635_56
Type: TC
Location: 72394 - 73293 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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