Cluster: SW068_maxbin.012_CGC7
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: SW068_maxbin.012
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_53661 | k141_53661_120 | 124404 | 125780 | - | GH13_20 |
| TC | k141_53661 | k141_53661_121 | 125934 | 127130 | - | 2.A.1.2.18 |
| TC | k141_53661 | k141_53661_122 | 127251 | 129611 | - | 9.A.8.1.6 |
| peptidase | k141_53661 | k141_53661_123 | 130084 | 130983 | - | S09.UPW |
| TC | k141_53661 | k141_53661_124 | 131228 | 131791 | + | 4.A.1.2.6 |
| pfam | k141_53661 | k141_53661_125 | 131973 | 133376 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | k141_53661 | k141_53661_126 | 133635 | 134420 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_53661 | k141_53661_127 | 134581 | 135561 | + | 3.A.1.34.1 |
| TC | k141_53661 | k141_53661_128 | 135766 | 136689 | + | 3.A.1.34.1 |
| TC | k141_53661 | k141_53661_129 | 136682 | 137476 | + | 3.A.1.34.1 |
Gene ID: k141_53661_120
Type: CAZyme
Location: 124404 - 125780 (-)
Type: CAZyme
Location: 124404 - 125780 (-)
Gene ID: k141_53661_121
Type: TC
Location: 125934 - 127130 (-)
Type: TC
Location: 125934 - 127130 (-)
Gene ID: k141_53661_122
Type: TC
Location: 127251 - 129611 (-)
Type: TC
Location: 127251 - 129611 (-)
Gene ID: k141_53661_123
Type: peptidase
Location: 130084 - 130983 (-)
Type: peptidase
Location: 130084 - 130983 (-)
Gene ID: k141_53661_124
Type: TC
Location: 131228 - 131791 (+)
Type: TC
Location: 131228 - 131791 (+)
Gene ID: k141_53661_125
Type: pfam
Location: 131973 - 133376 (+)
Type: pfam
Location: 131973 - 133376 (+)
Gene ID: k141_53661_126
Type:
Location: 133635 - 134420 (+)
Type:
Location: 133635 - 134420 (+)
Gene ID: k141_53661_127
Type: TC
Location: 134581 - 135561 (+)
Type: TC
Location: 134581 - 135561 (+)
Gene ID: k141_53661_128
Type: TC
Location: 135766 - 136689 (+)
Type: TC
Location: 135766 - 136689 (+)
Gene ID: k141_53661_129
Type: TC
Location: 136682 - 137476 (+)
Type: TC
Location: 136682 - 137476 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.