Cluster: SW068_maxbin.012_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SW068_maxbin.012
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_22214 | k141_22214_36 | 50913 | 51239 | + | 4.A.3.2.7 |
| TC | k141_22214 | k141_22214_37 | 51286 | 51579 | + | 4.A.3.2.6 |
| TC | k141_22214 | k141_22214_38 | 51589 | 52938 | + | 4.A.3.2.6 |
| CAZyme | k141_22214 | k141_22214_39 | 52940 | 54394 | + | GH1 |
Gene ID: k141_22214_36
Type: TC
Location: 50913 - 51239 (+)
Type: TC
Location: 50913 - 51239 (+)
Gene ID: k141_22214_37
Type: TC
Location: 51286 - 51579 (+)
Type: TC
Location: 51286 - 51579 (+)
Gene ID: k141_22214_38
Type: TC
Location: 51589 - 52938 (+)
Type: TC
Location: 51589 - 52938 (+)
Gene ID: k141_22214_39
Type: CAZyme
Location: 52940 - 54394 (+)
Type: CAZyme
Location: 52940 - 54394 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_22214_36 | vegetarian > vegan | 1.36653 | 0.01882 |
| k141_22214_37 | vegetarian > vegan | 2.13400 | 0.01882 |
| k141_22214_38 | vegetarian > vegan | 1.86210 | 0.01882 |
| k141_22214_39 | vegetarian > vegan | 1.99672 | 0.01882 |