Cluster: SW068_maxbin.012_CGC15
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: SW068_maxbin.012
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_21663 | k141_21663_36 | 29935 | 31356 | - | GH1 |
| TC | k141_21663 | k141_21663_37 | 31432 | 33210 | - | 4.A.3.1.1 |
| TF | k141_21663 | k141_21663_38 | 33486 | 34496 | + | LacI |
| TC | k141_21663 | k141_21663_39 | 34679 | 36439 | - | 4.A.3.1.1 |
| CAZyme | k141_21663 | k141_21663_40 | 36617 | 38059 | - | GH1 |
| TF | k141_21663 | k141_21663_41 | 38401 | 39438 | + | LacI |
| CAZyme | k141_21663 | k141_21663_42 | 39700 | 41139 | - | GH1 |
| TC | k141_21663 | k141_21663_43 | 41206 | 42981 | - | 4.A.3.1.1 |
| TF | k141_21663 | k141_21663_44 | 43339 | 44343 | + | LacI |
| TC | k141_21663 | k141_21663_45 | 44558 | 44896 | + | 4.A.3.1.2 |
Gene ID: k141_21663_36
Type: CAZyme
Location: 29935 - 31356 (-)
Type: CAZyme
Location: 29935 - 31356 (-)
Gene ID: k141_21663_37
Type: TC
Location: 31432 - 33210 (-)
Type: TC
Location: 31432 - 33210 (-)
Gene ID: k141_21663_38
Type: TF
Location: 33486 - 34496 (+)
Type: TF
Location: 33486 - 34496 (+)
Gene ID: k141_21663_39
Type: TC
Location: 34679 - 36439 (-)
Type: TC
Location: 34679 - 36439 (-)
Gene ID: k141_21663_40
Type: CAZyme
Location: 36617 - 38059 (-)
Type: CAZyme
Location: 36617 - 38059 (-)
Gene ID: k141_21663_41
Type: TF
Location: 38401 - 39438 (+)
Type: TF
Location: 38401 - 39438 (+)
Gene ID: k141_21663_42
Type: CAZyme
Location: 39700 - 41139 (-)
Type: CAZyme
Location: 39700 - 41139 (-)
Gene ID: k141_21663_43
Type: TC
Location: 41206 - 42981 (-)
Type: TC
Location: 41206 - 42981 (-)
Gene ID: k141_21663_44
Type: TF
Location: 43339 - 44343 (+)
Type: TF
Location: 43339 - 44343 (+)
Gene ID: k141_21663_45
Type: TC
Location: 44558 - 44896 (+)
Type: TC
Location: 44558 - 44896 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.