Cluster: SW057_27_CGC7
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: SW057_27
- CGC Family ID: CGCFAM_01155
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_221650 | k141_221650_112 | 114063 | 115739 | + | 2.A.2.3.2 |
| NULL(UNKNOWN) | k141_221650 | k141_221650_113 | 115856 | 116314 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_221650 | k141_221650_114 | 116464 | 117474 | - | HTH_AraC |
| CAZyme | k141_221650 | k141_221650_115 | 117639 | 118784 | + | GH43_3 |
| CAZyme | k141_221650 | k141_221650_116 | 118796 | 119977 | + | GH43_3 |
| STP | k141_221650 | k141_221650_117 | 119997 | 121490 | + | SBP_bac_1 |
| TC | k141_221650 | k141_221650_118 | 121512 | 122489 | + | 3.A.1.1.20 |
| TC | k141_221650 | k141_221650_119 | 122452 | 123345 | + | 3.A.1.1.36 |
| TC | k141_221650 | k141_221650_120 | 123354 | 124799 | + | 3.A.1.1.26 |
| pfam | k141_221650 | k141_221650_121 | 124819 | 126648 | + | Big_2 | Big_2 |
| pfam | k141_221650 | k141_221650_122 | 126678 | 128396 | + | Big_2 | Big_2 | Big-like | Big-like |
| CAZyme | k141_221650 | k141_221650_123 | 128470 | 130650 | + | GH36 |
| CAZyme | k141_221650 | k141_221650_124 | 130647 | 131597 | + | GH43_17 |
Gene ID: k141_221650_112
Type: TC
Location: 114063 - 115739 (+)
Type: TC
Location: 114063 - 115739 (+)
Gene ID: k141_221650_113
Type:
Location: 115856 - 116314 (-)
Type:
Location: 115856 - 116314 (-)
Gene ID: k141_221650_114
Type: TF
Location: 116464 - 117474 (-)
Type: TF
Location: 116464 - 117474 (-)
Gene ID: k141_221650_115
Type: CAZyme
Location: 117639 - 118784 (+)
Type: CAZyme
Location: 117639 - 118784 (+)
Gene ID: k141_221650_116
Type: CAZyme
Location: 118796 - 119977 (+)
Type: CAZyme
Location: 118796 - 119977 (+)
Gene ID: k141_221650_117
Type: STP
Location: 119997 - 121490 (+)
Type: STP
Location: 119997 - 121490 (+)
Gene ID: k141_221650_118
Type: TC
Location: 121512 - 122489 (+)
Type: TC
Location: 121512 - 122489 (+)
Gene ID: k141_221650_119
Type: TC
Location: 122452 - 123345 (+)
Type: TC
Location: 122452 - 123345 (+)
Gene ID: k141_221650_120
Type: TC
Location: 123354 - 124799 (+)
Type: TC
Location: 123354 - 124799 (+)
Gene ID: k141_221650_121
Type: pfam
Location: 124819 - 126648 (+)
Type: pfam
Location: 124819 - 126648 (+)
Gene ID: k141_221650_122
Type: pfam
Location: 126678 - 128396 (+)
Type: pfam
Location: 126678 - 128396 (+)
Gene ID: k141_221650_123
Type: CAZyme
Location: 128470 - 130650 (+)
Type: CAZyme
Location: 128470 - 130650 (+)
Gene ID: k141_221650_124
Type: CAZyme
Location: 130647 - 131597 (+)
Type: CAZyme
Location: 130647 - 131597 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp900545885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.