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Cluster: SW057_27_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_189416 k141_189416_380 451994 453883 + CBM48 | GH13_9
pfam k141_189416 k141_189416_381 453883 455088 + NTP_transferase | Hexapep_GlmU
pfam k141_189416 k141_189416_382 455100 456215 + NTP_transferase | Hexapep_GlmU
CAZyme k141_189416 k141_189416_383 456311 457732 + GT5
CAZyme k141_189416 k141_189416_384 457857 460286 + GT35
CAZyme k141_189416 k141_189416_385 460471 462276 + GH13_39
TC k141_189416 k141_189416_386 462651 464654 + 2.A.1.2.88
Gene ID: k141_189416_380
Type: CAZyme
Location: 451994 - 453883 (+)
Gene ID: k141_189416_381
Type: pfam
Location: 453883 - 455088 (+)
Gene ID: k141_189416_382
Type: pfam
Location: 455100 - 456215 (+)
Gene ID: k141_189416_383
Type: CAZyme
Location: 456311 - 457732 (+)
Gene ID: k141_189416_384
Type: CAZyme
Location: 457857 - 460286 (+)
Gene ID: k141_189416_385
Type: CAZyme
Location: 460471 - 462276 (+)
Gene ID: k141_189416_386
Type: TC
Location: 462651 - 464654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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