Cluster: SW056_bin.64_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SW056_bin.64
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_32190 | k141_32190_2 | 1563 | 3116 | + | 2.A.14.1.1 |
| pfam | k141_32190 | k141_32190_3 | 3359 | 3910 | - | LemA |
| pfam | k141_32190 | k141_32190_4 | 4136 | 4657 | + | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | k141_32190 | k141_32190_5 | 4661 | 7807 | - | GH3 |
| TC | k141_32190 | k141_32190_6 | 8139 | 10004 | + | 1.A.26.1.2 |
| TC | k141_32190 | k141_32190_7 | 10004 | 11311 | + | 2.A.55.3.6 |
Gene ID: k141_32190_2
Type: TC
Location: 1563 - 3116 (+)
Type: TC
Location: 1563 - 3116 (+)
Gene ID: k141_32190_3
Type: pfam
Location: 3359 - 3910 (-)
Type: pfam
Location: 3359 - 3910 (-)
Gene ID: k141_32190_4
Type: pfam
Location: 4136 - 4657 (+)
Type: pfam
Location: 4136 - 4657 (+)
Gene ID: k141_32190_5
Type: CAZyme
Location: 4661 - 7807 (-)
Type: CAZyme
Location: 4661 - 7807 (-)
Gene ID: k141_32190_6
Type: TC
Location: 8139 - 10004 (+)
Type: TC
Location: 8139 - 10004 (+)
Gene ID: k141_32190_7
Type: TC
Location: 10004 - 11311 (+)
Type: TC
Location: 10004 - 11311 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_32190_5 | vegetarian > vegan | 1.36103 | 0.01684 |
| k141_32190_7 | vegetarian > vegan | 1.02100 | 0.01684 |