Cluster: SW054_bin.78_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SW054_bin.78
- CGC Family ID: CGCFAM_00881
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_130283 | k141_130283_10 | 8886 | 9914 | + | GH25 |
| NULL(UNKNOWN) | k141_130283 | k141_130283_11 | 10069 | 10251 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_130283 | k141_130283_12 | 10400 | 10531 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_130283 | k141_130283_13 | 11586 | 13619 | + | 3.A.1.121.4 |
| NULL(UNKNOWN) | k141_130283 | k141_130283_14 | 13606 | 13902 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_130283 | k141_130283_15 | 13912 | 14595 | + | 9.B.149.1.11 |
Gene ID: k141_130283_10
Type: CAZyme
Location: 8886 - 9914 (+)
Type: CAZyme
Location: 8886 - 9914 (+)
Gene ID: k141_130283_11
Type:
Location: 10069 - 10251 (-)
Type:
Location: 10069 - 10251 (-)
Gene ID: k141_130283_12
Type:
Location: 10400 - 10531 (-)
Type:
Location: 10400 - 10531 (-)
Gene ID: k141_130283_13
Type: TC
Location: 11586 - 13619 (+)
Type: TC
Location: 11586 - 13619 (+)
Gene ID: k141_130283_14
Type:
Location: 13606 - 13902 (+)
Type:
Location: 13606 - 13902 (+)
Gene ID: k141_130283_15
Type: TC
Location: 13912 - 14595 (+)
Type: TC
Location: 13912 - 14595 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.